CDS

Accession Number TCMCG077C08701
gbkey CDS
Protein Id KAF5733957.1
Location complement(join(3130798..3130980,3131219..3131496,3131816..3131954,3132040..3132142,3132504..3132625,3132717..3133094))
Organism Tripterygium wilfordii
locus_tag HS088_TW16G00398

Protein

Length 400aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA542587, BioSample:SAMN11634134
db_source JAAARO010000016.1
Definition hypothetical protein HS088_TW16G00398 [Tripterygium wilfordii]
Locus_tag HS088_TW16G00398

EGGNOG-MAPPER Annotation

COG_category S
Description Chloroplast stem-loop binding protein of 41 kDa
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005840        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008187        [VIEW IN EMBL-EBI]
GO:0008266        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009534        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009658        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009735        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010287        [VIEW IN EMBL-EBI]
GO:0010319        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031976        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032544        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034250        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045727        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048046        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCACTCTCTGTTCTTCATCAGCCTCTTCTCTCCTCTTCTCCTCTCCAATCTCAAAACCCAAGTCTCCTTCACTTTCTCCCTCTCTACGTCTCTCTTCTCTTTCCTCTCTTTCTCACTTCTCATCTCTTTCATTCTCTTTTCATACCTTCAATTACTGTACAAGTACTTCCAGGCGCCAATCCTTCAGTCTCAAGGCCAGTGCTTCATCAGCGAAGAAGAAGGTTGTTATTGTTAATACCAATAGTGGTGGGCATGCTGTTATTGGGTTCTATTTTGCAAAGGAGCTTCTGGGTTCTGGCCATGAAGTCACAATCTTGACTGTTGGTGATGAGGGCTCAGACAAAATGAAAAAGCCCCCATTTAACAGATTCTCAGAAATTGTGACTGCTGGAGGGAAAACTGTGTGGGGAAACCCGTCAGATATTGGGAAGGTTTTGGAAGGGGAAGAAGCTGATGTGGTGTTAGATAACAATGGCAAGGACCTAGACACTGTTAGGCCAGTGGTGGATTGGGCTAAGAGTATTGGTGTTAAGCAGTTCTTGTACATCAGCAGTGCTGGAATCTACAAGCCAACTGATGAGCCTCCTCATGTTGAAGGGGATGTTGTGAAAGCTGATGCTGGTCATGTTGGAGTGGAGAAGTACATCGAAGAGATTTTTGGTAGTTGGGCGATATTCCGTCCTCAATACATGATTGGGTCTGGCAACAACAAAGATTGTGAAGAGTGGTTCTTTGATAGGATTGTTCGGAAAAGGCCGGTACCAATTCCTGGTTCTGGGATGCAACTCACAAACATTGCCCATGTGAGGGATTTGTCCTCAATGCTTACTCTTGCTGTTGAGAAGCCAGATGCAGCACGTGGTAACATATTCAACTGTGTTAGCGATCGTGCTGTCACTTTGGATGGACTGGCCAAACTATGTGCTCAGGCTGCAGGTCTACCACTTGAAATTGTGCATTATGATCCAAAGGCCCTAGGAATTGATGCTAAGAAGGCTTTTCCCTTCCGCAATATGCACTTCTATGCGGAACCAAGAGCCGCTAAGGAGATTTTGGGGTGGGGTGGCACGACAAACCTTCCCGCGGACTTGAAGGAGCGATTTGAAGAGTATGTAAAGATCGGAAGAGACAAGAAGCCCATGGCATTCGAGTTAGATGATAAAATATTAGAGTCAATCAAGGTTCCAGTAGCTGCATGA
Protein:  
MATLCSSSASSLLFSSPISKPKSPSLSPSLRLSSLSSLSHFSSLSFSFHTFNYCTSTSRRQSFSLKASASSAKKKVVIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGDEGSDKMKKPPFNRFSEIVTAGGKTVWGNPSDIGKVLEGEEADVVLDNNGKDLDTVRPVVDWAKSIGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIEEIFGSWAIFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDAARGNIFNCVSDRAVTLDGLAKLCAQAAGLPLEIVHYDPKALGIDAKKAFPFRNMHFYAEPRAAKEILGWGGTTNLPADLKERFEEYVKIGRDKKPMAFELDDKILESIKVPVAA